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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1020: 9388 - K01527 EGD1, BTF3 nascent polypeptide-associated complex subunit beta, at 222142 to 223175
9388
mRNA_1021: 9389 - KOG3457 Sec61 protein translocation complex, beta subunit, at 223629 to 224377
9389
mRNA_1022: 9390 - KOG1550 Extracellular protein SEL-1 and related proteins, at 224870 to 227887
9390
mRNA_1023: 9391 - K08272 CAB39, MO25 calcium binding protein 39, at 228517 to 230203
9391
mRNA_1024: 9392 - HMMPfam-Thaumatin family-PF00314,PIRSF--PIRSF002703,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 230632 to 231986
9392
Group
Condition
mRNA_1020
mRNA_1021
mRNA_1022
mRNA_1023
mRNA_1024
9388
9389
9390
9391
9392
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.6
-1.0
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
-0.4
-1.9
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.3
-1.7
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-1.1
-0.3
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.9
-0.2
growth on ricinoleic acid
YNB Glucose
-0.7
-0.3
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.4
-0.8
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.8
-0.2
growth on oleic acid
YNB Glucose
-0.4
-0.2
-0.7
growth on oleic acid
YNB Oleic Acid
-0.1
-0.6
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.8
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.3
-0.7
auxotrophy
Dropout Complete
-0.1
-0.5
-0.2
auxotrophy
YNB Glucose
0.1
-0.7
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.4
-0.4
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.1
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.5
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.6
-0.5
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.1
0.3
growth on ypd
YPD
-0.1
0.0
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
-0.1
0.5
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