Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1019: 9387 - K02835 prfA, MTRF1, MRF1 peptide chain release factor 1, at 220275 to 221904 9387 mRNA_1020: 9388 - K01527 EGD1, BTF3 nascent polypeptide-associated complex subunit beta, at 222142 to 223175 9388 mRNA_1021: 9389 - KOG3457 Sec61 protein translocation complex, beta subunit, at 223629 to 224377 9389 mRNA_1022: 9390 - KOG1550 Extracellular protein SEL-1 and related proteins, at 224870 to 227887 9390 mRNA_1023: 9391 - K08272 CAB39, MO25 calcium binding protein 39, at 228517 to 230203 9391
Group Condition mRNA_1019 mRNA_1020 mRNA_1021 mRNA_1022 mRNA_1023
9387
9388
9389
9390
9391
growth on ricinoleic acid YNB Ricinoleic Acid   -0.6   -1.0  
auxotrophy YNB Glucose 75mM Arginine   -0.2   -1.1  
auxotrophy YNB Glucose 75mM Methionine   -0.4   -0.9  
ypd buoyancy 40 hrs Low Buoyancy   -0.4   -0.8  
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.3   -0.8  
growth on ricinoleic acid YNB Glucose   -0.7   -0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.2   -0.8  
growth on oleic acid YNB Oleic Acid   -0.1   -0.6  
auxotrophy Dropout Complete   -0.1   -0.5  
growth on oleic acid YNB Glucose   -0.4   -0.2  
auxotrophy YNB Glucose   0.1   -0.7  
facs on lipid accumulation Sorted No BODIPY Gate   0.0   -0.4  
ypd buoyancy 40 hrs No Buoyancy Separation   0.1   -0.3  
facs on lipid accumulation Sorted High BODIPY Gate   0.1   -0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.3   -0.4  
ypd buoyancy 40 hrs High Buoyancy   -0.0   -0.1  
growth on ypd YPD   -0.1   0.0  
facs on lipid accumulation Sorted Low BODIPY Gate   0.5   -0.4  
ypd buoyancy 40 hrs Median Buoyancy   0.0   0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.6   -0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.5   -0.1  
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