Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1018: 9386 - KOG3488 Dolichol phosphate-mannose regulatory protein (DPM2), at 219335 to 219910 9386 mRNA_1019: 9387 - K02835 prfA, MTRF1, MRF1 peptide chain release factor 1, at 220275 to 221904 9387 mRNA_1020: 9388 - K01527 EGD1, BTF3 nascent polypeptide-associated complex subunit beta, at 222142 to 223175 9388 mRNA_1021: 9389 - KOG3457 Sec61 protein translocation complex, beta subunit, at 223629 to 224377 9389 mRNA_1022: 9390 - KOG1550 Extracellular protein SEL-1 and related proteins, at 224870 to 227887 9390
Group Condition mRNA_1018 mRNA_1019 mRNA_1020 mRNA_1021 mRNA_1022
9386
9387
9388
9389
9390
growth on ricinoleic acid YNB Ricinoleic Acid     -0.6   -1.0
auxotrophy YNB Glucose 75mM Arginine     -0.2   -1.1
auxotrophy YNB Glucose 75mM Methionine     -0.4   -0.9
ypd buoyancy 40 hrs Low Buoyancy     -0.4   -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.3   -0.8
growth on ricinoleic acid YNB Glucose     -0.7   -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.2   -0.8
growth on oleic acid YNB Oleic Acid     -0.1   -0.6
auxotrophy Dropout Complete     -0.1   -0.5
growth on oleic acid YNB Glucose     -0.4   -0.2
auxotrophy YNB Glucose     0.1   -0.7
facs on lipid accumulation Sorted No BODIPY Gate     0.0   -0.4
ypd buoyancy 40 hrs No Buoyancy Separation     0.1   -0.3
facs on lipid accumulation Sorted High BODIPY Gate     0.1   -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy     0.3   -0.4
ypd buoyancy 40 hrs High Buoyancy     -0.0   -0.1
growth on ypd YPD     -0.1   0.0
facs on lipid accumulation Sorted Low BODIPY Gate     0.5   -0.4
ypd buoyancy 40 hrs Median Buoyancy     0.0   0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     0.6   -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.5   -0.1
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