Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_1009: 9377 - K12659 ARG56 N-acetyl-gamma-glutamyl-phosphate reductase / acetylglutamate kinase, at 194159 to 197453 9377 mRNA_1010: 9378 - K16569 TUBGCP2, GCP2 gamma-tubulin complex component 2, at 198113 to 201234 9378 mRNA_1011: 9379 - Hypothetical Protein, at 203072 to 203287 9379 mRNA_1012: 9380 - Hypothetical Protein, at 203775 to 207320 9380 mRNA_1013: 9381 - K11761 NPL6, RSC7 chromatin structure-remodeling complex protein RSC7, at 207547 to 209466 9381
Group Condition mRNA_1009 mRNA_1010 mRNA_1011 mRNA_1012 mRNA_1013
9377
9378
9379
9380
9381
buoyancy on lipid accumulation 40 hrs Low Buoyancy -4.5   -0.8 -0.5  
auxotrophy YNB Glucose 75mM Methionine -4.7   -0.6 -0.4  
growth on oleic acid YNB Glucose -4.8   -0.3 -0.3  
auxotrophy YNB Glucose -4.4   -0.5 -0.3  
growth on ricinoleic acid YNB Glucose -4.0   -0.5 -0.5  
growth on ricinoleic acid YNB Methylricinoleic Acid -4.0   -0.6 -0.2  
growth on oleic acid YNB Oleic Acid -3.1   -0.7 -0.3  
growth on ricinoleic acid YNB Ricinoleic Acid -3.9   -0.3 0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -4.0   0.2 0.1  
facs on lipid accumulation Sorted High BODIPY Gate -3.5   -0.2 0.1  
facs on lipid accumulation Sorted No BODIPY Gate -3.2   -0.0 -0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -2.9   -0.1 -0.1  
facs on lipid accumulation Sorted Low BODIPY Gate -3.2   -0.0 0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy -2.8   -0.0 0.0  
auxotrophy YNB Glucose 75mM Arginine -0.1   -0.8 -0.3  
auxotrophy Dropout Complete -0.1   -0.2 -0.5  
ypd buoyancy 40 hrs High Buoyancy -0.3   0.0 -0.1  
growth on ypd YPD -0.1   -0.0 -0.0  
ypd buoyancy 40 hrs Low Buoyancy -0.3   0.2 0.0  
ypd buoyancy 40 hrs Median Buoyancy -0.1   0.0 0.1  
ypd buoyancy 40 hrs No Buoyancy Separation -0.1   0.0 0.2  
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