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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1006: 9374 - KOG4569 Predicted lipase, at 188789 to 191273
9374
mRNA_1007: 9375 - HMMPfam-S1/P1 Nuclease-PF02265,SUPERFAMILY--SSF48537, at 191628 to 193033
9375
mRNA_1008: 9376 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 193375 to 193873
9376
mRNA_1009: 9377 - K12659 ARG56 N-acetyl-gamma-glutamyl-phosphate reductase / acetylglutamate kinase, at 194159 to 197453
9377
mRNA_1010: 9378 - K16569 TUBGCP2, GCP2 gamma-tubulin complex component 2, at 198113 to 201234
9378
Group
Condition
mRNA_1006
mRNA_1007
mRNA_1008
mRNA_1009
mRNA_1010
9374
9375
9376
9377
9378
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.4
-0.4
-4.7
growth on oleic acid
YNB Glucose
0.2
0.1
-0.2
-4.8
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.5
-0.3
-3.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.2
-0.2
-4.0
growth on ricinoleic acid
YNB Glucose
0.3
-0.3
-0.2
-4.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.2
-0.8
-0.0
-3.5
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.9
-0.2
-3.2
auxotrophy
YNB Glucose
0.1
0.6
-0.2
-4.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.2
-0.3
-3.2
growth on oleic acid
YNB Oleic Acid
-0.0
0.4
-0.1
-3.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
1.7
0.0
-4.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.0
1.0
-0.2
-2.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
1.6
0.4
-4.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-1.0
0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
2.1
-0.4
-2.8
growth on ypd
YPD
0.1
-0.4
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.6
0.7
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.1
0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.0
0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.1
0.1
-0.1
auxotrophy
Dropout Complete
0.2
0.1
0.0
-0.1
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