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Cofit
Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_1004: 9372 - K02220 CLB1_2 G2/mitotic-specific cyclin 1/2, at 183792 to 186232
9372
mRNA_1005: 9373 - K08794 CAMK1 calcium/calmodulin-dependent protein kinase I, at 186567 to 188548
9373
mRNA_1006: 9374 - KOG4569 Predicted lipase, at 188789 to 191273
9374
mRNA_1007: 9375 - HMMPfam-S1/P1 Nuclease-PF02265,SUPERFAMILY--SSF48537, at 191628 to 193033
9375
mRNA_1008: 9376 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 193375 to 193873
9376
Group
Condition
mRNA_1004
mRNA_1005
mRNA_1006
mRNA_1007
mRNA_1008
9372
9373
9374
9375
9376
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.3
-1.0
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
0.2
-0.9
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.1
-0.5
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.1
-0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
0.2
-0.8
-0.0
growth on ricinoleic acid
YNB Glucose
-0.2
0.3
-0.3
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.0
-0.6
0.7
growth on ypd
YPD
0.2
0.1
-0.4
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.2
-0.4
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.1
0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.2
0.2
-0.3
growth on oleic acid
YNB Glucose
0.0
0.2
0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.0
-0.0
0.2
growth on oleic acid
YNB Oleic Acid
-0.0
-0.0
0.4
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.2
-0.1
0.1
auxotrophy
Dropout Complete
0.3
0.2
0.1
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.0
1.0
-0.2
auxotrophy
YNB Glucose
0.4
0.1
0.6
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
0.1
1.7
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
0.1
2.1
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.0
1.6
0.4
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