Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_993: 9361 - HMMPfam-Zinc finger, C2H2 type-PF00096,HMMPfam-C2H2-type zinc finger-PF13894,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SMART-zinc finger-SM00355,SUPERFAMILY--SSF57667, at 151634 to 153360 9361 mRNA_994: 9362 - K08513 VAMP4 vesicle-associated membrane protein 4, at 154065 to 154836 9362 mRNA_995: 9363 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 155513 to 160267 9363 mRNA_996: 9364 - K19791 FET3_5 iron transport multicopper oxidase, at 160516 to 163771 9364 mRNA_997: 9365 - K08735 MSH2 DNA mismatch repair protein MSH2, at 164007 to 168056 9365
Group Condition mRNA_993 mRNA_994 mRNA_995 mRNA_996 mRNA_997
9361
9362
9363
9364
9365
growth on oleic acid YNB Glucose -0.2 -0.0 -0.4 -5.5 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4 -0.1 -5.2 -0.4
auxotrophy YNB Glucose -0.1 -0.5 0.1 -4.9 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -1.2 0.1 -3.4 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.4 0.0 -4.4 -0.3
growth on ricinoleic acid YNB Glucose -0.5 -0.1 -0.0 -3.7 -0.4
auxotrophy Dropout Complete -0.1 -0.4 0.1 -3.8 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.4 0.0 -2.7 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.3 -0.1 -3.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.3 -0.1 -2.9 0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.3 -0.2 -1.4 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.6 0.0 -2.4 0.0
growth on ypd YPD 0.1 0.1 0.0 -1.1 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.0 -0.4 -0.3 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 0.1 -0.3 -0.2 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.3 -0.4 -0.3 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.4 -0.4 0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.6 0.4 0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.4 -0.2 0.3 -0.4 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.4 -0.3 0.1 -0.1 0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1 -0.1 0.4 0.3
remove
mRNA_993
plot
remove
mRNA_994
plot
remove
mRNA_995
remove
mRNA_996
plot
remove
mRNA_997
plot