Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_992: 9360 - HMMPfam-OPT oligopeptide transporter protein-PF03169, at 149516 to 150268 9360 mRNA_993: 9361 - HMMPfam-Zinc finger, C2H2 type-PF00096,HMMPfam-C2H2-type zinc finger-PF13894,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SMART-zinc finger-SM00355,SUPERFAMILY--SSF57667, at 151634 to 153360 9361 mRNA_994: 9362 - K08513 VAMP4 vesicle-associated membrane protein 4, at 154065 to 154836 9362 mRNA_995: 9363 - KOG0065 Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily, at 155513 to 160267 9363 mRNA_996: 9364 - K19791 FET3_5 iron transport multicopper oxidase, at 160516 to 163771 9364
Group Condition mRNA_992 mRNA_993 mRNA_994 mRNA_995 mRNA_996
9360
9361
9362
9363
9364
growth on oleic acid YNB Glucose 0.1 -0.2 -0.0 -0.4 -5.5
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.1 -0.4 -0.1 -5.2
auxotrophy YNB Glucose 0.4 -0.1 -0.5 0.1 -4.9
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.5 -1.2 0.1 -3.4
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.1 -0.4 0.0 -4.4
auxotrophy Dropout Complete 0.4 -0.1 -0.4 0.1 -3.8
growth on ricinoleic acid YNB Glucose 0.4 -0.5 -0.1 -0.0 -3.7
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.2 0.3 -0.1 -3.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 0.3 -0.1 -2.9
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 -0.3 -0.4 0.0 -2.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 0.1 0.6 0.0 -2.4
growth on oleic acid YNB Oleic Acid 0.2 -0.3 -0.3 -0.2 -1.4
growth on ypd YPD -0.3 0.1 0.1 0.0 -1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.6 0.0 0.1 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.2 -0.0 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.1 0.3 -0.4 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.4 -0.2 0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.4 -0.3 0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 0.2 -0.1 -0.1 0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.1 -0.6 0.4 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.0 0.4 -0.4 0.2
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