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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_990: 9358 - Hypothetical Protein, at 146849 to 147409
9358
mRNA_991: 9359 - HMMPfam-Uncharacterised protein family, YAP/Alf4/glomulin-PF08568, at 147829 to 149137
9359
mRNA_992: 9360 - HMMPfam-OPT oligopeptide transporter protein-PF03169, at 149516 to 150268
9360
mRNA_993: 9361 - HMMPfam-Zinc finger, C2H2 type-PF00096,HMMPfam-C2H2-type zinc finger-PF13894,ProSitePatterns-Zinc finger C2H2 type domain signature.-PS00028,ProSiteProfiles-Zinc finger C2H2 type domain profile.-PS50157,SMART-zinc finger-SM00355,SUPERFAMILY--SSF57667, at 151634 to 153360
9361
mRNA_994: 9362 - K08513 VAMP4 vesicle-associated membrane protein 4, at 154065 to 154836
9362
Group
Condition
mRNA_990
mRNA_991
mRNA_992
mRNA_993
mRNA_994
9358
9359
9360
9361
9362
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.4
0.1
-0.5
-1.2
auxotrophy
YNB Glucose 75mM Arginine
-2.1
0.2
-0.1
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-2.6
0.2
-0.2
0.3
auxotrophy
YNB Glucose 75mM Methionine
-1.7
0.0
-0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-2.2
-0.2
-0.1
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-1.6
0.3
-0.3
-0.4
growth on oleic acid
YNB Glucose
-1.8
0.1
-0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.7
-0.7
0.1
0.6
growth on oleic acid
YNB Oleic Acid
-1.3
0.2
-0.3
-0.3
auxotrophy
YNB Glucose
-1.5
0.4
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.0
-0.6
0.0
0.1
growth on ricinoleic acid
YNB Glucose
-1.3
0.4
-0.5
-0.1
auxotrophy
Dropout Complete
-1.1
0.4
-0.1
-0.4
growth on ypd
YPD
-0.5
-0.3
0.1
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.3
0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.1
0.1
-0.6
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.2
0.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.5
0.2
0.2
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.0
0.0
0.4
ypd buoyancy
40 hrs Median Buoyancy
0.3
-0.2
0.4
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.1
0.1
0.3
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