Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_976: 9344 - SUPERFAMILY--SSF54928, at 118269 to 121735 9344 mRNA_977: 9345 - KOG1378 Purple acid phosphatase, at 122098 to 123952 9345 mRNA_978: 9346 - Hypothetical Protein, at 124413 to 124580 9346 mRNA_979: 9347 - K03123 TFIIA2, GTF2A2, TOA2 transcription initiation factor TFIIA small subunit, at 124895 to 125472 9347 mRNA_980: 9348 - K03946 NDUFA2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2, at 126014 to 126825 9348
Group Condition mRNA_976 mRNA_977 mRNA_978 mRNA_979 mRNA_980
9344
9345
9346
9347
9348
auxotrophy Dropout Complete -0.1 0.0 -1.4    
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.1 -1.5    
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.3 -1.0    
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.4 -0.8    
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.2 -1.3    
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 -0.8    
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.1 -0.8    
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.0 -1.0    
auxotrophy YNB Glucose -0.1 0.0 -0.8    
growth on ricinoleic acid YNB Glucose -0.2 0.0 -0.6    
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.0 -0.4    
growth on oleic acid YNB Glucose 0.0 -0.3 -0.5    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.0 -0.4    
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.2 -0.3    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.1 0.1    
auxotrophy YNB Glucose 75mM Arginine 0.1 0.1 -0.0    
growth on ypd YPD 0.2 0.2 -0.1    
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.2 -0.0    
growth on oleic acid YNB Oleic Acid -0.1 -0.0 0.5    
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.0 0.9    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.2 1.1    
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