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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_976: 9344 - SUPERFAMILY--SSF54928, at 118269 to 121735
9344
mRNA_977: 9345 - KOG1378 Purple acid phosphatase, at 122098 to 123952
9345
mRNA_978: 9346 - Hypothetical Protein, at 124413 to 124580
9346
mRNA_979: 9347 - K03123 TFIIA2, GTF2A2, TOA2 transcription initiation factor TFIIA small subunit, at 124895 to 125472
9347
mRNA_980: 9348 - K03946 NDUFA2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 2, at 126014 to 126825
9348
Group
Condition
mRNA_976
mRNA_977
mRNA_978
mRNA_979
mRNA_980
9344
9345
9346
9347
9348
auxotrophy
Dropout Complete
-0.1
0.0
-1.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
0.1
-1.5
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.3
-1.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.4
-0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
0.2
-1.3
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.3
-0.8
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
0.1
-0.8
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.0
-1.0
auxotrophy
YNB Glucose
-0.1
0.0
-0.8
growth on ricinoleic acid
YNB Glucose
-0.2
0.0
-0.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
0.0
-0.4
growth on oleic acid
YNB Glucose
0.0
-0.3
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.0
-0.4
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.2
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
-0.1
0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.1
-0.0
growth on ypd
YPD
0.2
0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.2
-0.0
growth on oleic acid
YNB Oleic Acid
-0.1
-0.0
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
-0.0
0.9
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.2
1.1
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