Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_945: 9313 - Hypothetical Protein, at 37394 to 37567 9313 mRNA_946: 9314 - Hypothetical Protein, at 38031 to 38831 9314 mRNA_947: 9315 - K00623 CHAT choline O-acetyltransferase, at 38984 to 41581 9315 mRNA_948: 9316 - KOG2641 Predicted seven transmembrane receptor - rhodopsin family, at 41701 to 44858 9316 mRNA_949: 9317 - KOG1268 Glucosamine 6-phosphate synthetases, contain amidotransferase and phosphosugar isomerase domains, at 45301 to 46716 9317
Group Condition mRNA_945 mRNA_946 mRNA_947 mRNA_948 mRNA_949
9313
9314
9315
9316
9317
ypd buoyancy 40 hrs No Buoyancy Separation   -0.4 -0.3 -0.3 -0.2
ypd buoyancy 40 hrs Low Buoyancy   -0.1 -0.4 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy   0.1 -0.5 -0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy   0.2 -0.4 -0.1 -0.2
growth on oleic acid YNB Oleic Acid   -0.1 0.0 -0.1 -0.0
growth on oleic acid YNB Glucose   0.1 0.0 -0.1 -0.1
growth on ricinoleic acid YNB Glucose   -0.1 0.0 -0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.1 0.3 -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid   0.3 -0.2 -0.0 0.0
facs on lipid accumulation Sorted Low BODIPY Gate   -0.1 0.2 0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.5 0.1 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.3 -0.0 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.4 -0.2 -0.1 -0.0
growth on ypd YPD   0.1 0.0 0.0 0.1
facs on lipid accumulation Sorted No BODIPY Gate   0.1 0.0 0.0 0.1
growth on ricinoleic acid YNB Ricinoleic Acid   0.2 -0.3 0.1 0.4
auxotrophy YNB Glucose   0.1 0.7 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine   0.2 0.6 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine   0.2 0.4 0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.7 0.1 -0.2 0.1
auxotrophy Dropout Complete   0.3 0.8 0.0 0.0
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