Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_941: 9309 - HMMPfam-Calcineurin-like phosphoesterase-PF00149,SUPERFAMILY--SSF56300, at 27276 to 29421 9309 mRNA_942: 9310 - KOG1743 Ferric reductase-like proteins, at 29520 to 30621 9310 mRNA_943: 9311 - K05759 PFN profilin, at 30809 to 31667 9311 mRNA_944: 9312 - Hypothetical Protein, at 32373 to 33071 9312 mRNA_945: 9313 - Hypothetical Protein, at 37394 to 37567 9313
Group Condition mRNA_941 mRNA_942 mRNA_943 mRNA_944 mRNA_945
9309
9310
9311
9312
9313
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2   -0.7  
growth on ypd YPD -0.2 0.2   -0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 -0.2   0.0  
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.4   0.2  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.4   0.2  
growth on ricinoleic acid YNB Glucose -0.4 0.4   0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.4   0.2  
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.4   0.1  
auxotrophy Dropout Complete -0.4 1.1   -0.4  
auxotrophy YNB Glucose 75mM Methionine -0.3 0.7   0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.1   0.1  
auxotrophy YNB Glucose 75mM Arginine -0.1 0.5   0.2  
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.7   -0.2  
auxotrophy YNB Glucose -0.3 0.8   0.3  
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.6   0.0  
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 1.3   -0.1  
growth on oleic acid YNB Glucose 0.1 0.4   0.7  
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 0.6   0.2  
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.9   0.4  
growth on oleic acid YNB Oleic Acid 0.1 0.9   0.5  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 1.8   -0.4  
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