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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Number of genes on each side:
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_938: 9306 - Hypothetical Protein, at 21182 to 22697
9306
mRNA_939: 9307 - Hypothetical Protein, at 23746 to 25185
9307
mRNA_940: 9308 - Hypothetical Protein, at 25419 to 26964
9308
mRNA_941: 9309 - HMMPfam-Calcineurin-like phosphoesterase-PF00149,SUPERFAMILY--SSF56300, at 27276 to 29421
9309
mRNA_942: 9310 - KOG1743 Ferric reductase-like proteins, at 29520 to 30621
9310
Group
Condition
mRNA_938
mRNA_939
mRNA_940
mRNA_941
mRNA_942
9306
9307
9308
9309
9310
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.0
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.2
-0.1
0.1
-0.4
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
0.1
-0.4
0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.4
-0.2
0.2
0.9
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.1
-0.1
-0.1
0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.6
0.3
0.2
-0.4
growth on oleic acid
YNB Glucose
-0.1
-0.1
0.2
0.1
0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.1
0.2
-0.1
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.6
0.4
0.0
-0.2
auxotrophy
YNB Glucose
-0.2
0.0
0.3
-0.3
0.8
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.0
0.0
0.3
0.7
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.2
0.2
-0.3
0.7
auxotrophy
Dropout Complete
-0.1
0.0
0.1
-0.4
1.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
0.6
0.2
0.2
0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
0.3
0.1
0.9
growth on ypd
YPD
0.4
0.3
0.1
-0.2
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.5
0.2
-0.3
0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
0.1
0.1
0.4
0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
0.5
0.3
0.5
0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
-0.2
-0.0
0.4
1.8
growth on ricinoleic acid
YNB Ricinoleic Acid
0.4
0.0
0.2
0.1
1.3
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