Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_932: 9300 - K01803 TPI, tpiA triosephosphate isomerase (TIM), at 6530 to 8158 9300 mRNA_933: 9301 - HMMPfam-NDT80 / PhoG like DNA-binding family-PF05224,ProSiteProfiles-NDT80 DNA-binding domain profile.-PS51517,SUPERFAMILY--SSF49417, at 9624 to 11846 9301 mRNA_934: 9302 - K18726 FAF2, UBXD8 FAS-associated factor 2, at 12086 to 14306 9302 mRNA_935: 9303 - HMMPfam-Glycosyl Hydrolase Family 88-PF07470,SUPERFAMILY--SSF48208, at 14546 to 16225 9303 mRNA_936: 9304 - K10365 CAPZB capping protein (actin filament) muscle Z-line, beta, at 16670 to 18291 9304
Group Condition mRNA_932 mRNA_933 mRNA_934 mRNA_935 mRNA_936
9300
9301
9302
9303
9304
auxotrophy YNB Glucose 75mM Methionine   -0.4 -0.2 -0.3 -0.3
auxotrophy Dropout Complete   0.0 -0.4 -0.1 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation   -0.8 0.2 0.1 -0.4
auxotrophy YNB Glucose   -0.3 -0.1 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine   -0.1 -0.3 -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate   0.5 -0.9 0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy   -0.2 0.2 -0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy   -0.3 0.2 -0.0 -0.0
growth on oleic acid YNB Oleic Acid   -0.3 -0.2 0.1 0.3
growth on ricinoleic acid YNB Glucose   -0.2 -0.4 0.1 0.5
facs on lipid accumulation Sorted No BODIPY Gate   0.4 0.1 -0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.1 -0.4 0.2 0.5
ypd buoyancy 40 hrs Median Buoyancy   -0.1 0.4 -0.1 0.1
growth on ypd YPD   0.8 -1.1 0.2 0.4
growth on oleic acid YNB Glucose   0.0 0.2 0.0 0.3
growth on ricinoleic acid YNB Ricinoleic Acid   -0.0 -0.1 0.2 0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.5 -0.3 0.2 0.6
facs on lipid accumulation Sorted High BODIPY Gate   0.2 1.0 -0.1 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.3 -0.1 0.3 0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.6 -0.2 0.3 1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.6 -0.0 0.1 1.2
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