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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_919: 9287 - KOG1397 Ca2+/H+ antiporter VCX1 and related proteins, at 2192873 to 2195509
9287
mRNA_920: 9288 - BLAST cytochrome c heme-binding site [Moesziomyces anta..., at 2196157 to 2196942
9288
mRNA_921: 9289 - KOG1485 Mitochondrial Fe2+ transporter MMT1 and related transporters (cation diffusion facilitator superfamily), at 2197080 to 2198559
9289
mRNA_922: 9290 - K06110 EXOC3, SEC6 exocyst complex component 3, at 2198886 to 2201562
9290
mRNA_923: 9291 - K03446 emrB MFS transporter, DHA2 family, multidrug resistance protein, at 2202019 to 2204450
9291
Group
Condition
mRNA_919
mRNA_920
mRNA_921
mRNA_922
mRNA_923
9287
9288
9289
9290
9291
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.3
-1.6
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.6
-0.5
-0.0
growth on oleic acid
YNB Glucose
-0.1
-0.4
0.2
0.0
growth on ricinoleic acid
YNB Glucose
-0.0
-0.4
0.1
-0.1
growth on oleic acid
YNB Oleic Acid
-0.2
-0.4
0.5
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.5
0.2
0.4
ypd buoyancy
40 hrs High Buoyancy
0.1
0.1
-0.0
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.1
0.2
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.0
-0.5
0.7
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.1
0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.0
0.4
-0.0
auxotrophy
Dropout Complete
-0.1
0.3
0.2
0.1
auxotrophy
YNB Glucose
0.0
-0.0
0.3
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.1
0.5
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.3
1.0
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.1
0.8
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
0.5
0.3
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
0.1
1.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.1
1.0
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.5
0.7
0.1
growth on ypd
YPD
0.2
0.2
1.1
0.0
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