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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_907: 9275 - K20523 SH3YL1 SH3 domain-containing YSC84-like protein 1, at 2170887 to 2172443
9275
mRNA_908: 9276 - Hypothetical Protein, at 2172531 to 2173610
9276
mRNA_909: 9277 - KOG0254 Predicted transporter (major facilitator superfamily), at 2173901 to 2176309
9277
mRNA_910: 9278 - K00794 ribH, RIB4 6,7-dimethyl-8-ribityllumazine synthase, at 2176835 to 2177637
9278
mRNA_911: 9279 - KOG1773 Stress responsive protein, at 2177969 to 2178702
9279
Group
Condition
mRNA_907
mRNA_908
mRNA_909
mRNA_910
mRNA_911
9275
9276
9277
9278
9279
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.9
0.3
0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.7
0.4
0.3
-0.3
growth on ricinoleic acid
YNB Glucose
0.3
0.2
-0.1
-0.6
growth on ypd
YPD
-0.2
0.4
-0.1
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.0
0.3
0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.1
0.3
-0.4
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
0.3
0.0
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.0
0.2
-0.1
auxotrophy
Dropout Complete
0.3
-0.0
-0.1
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
0.3
0.1
0.3
growth on oleic acid
YNB Oleic Acid
-0.3
0.1
0.2
0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.3
0.4
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-0.0
0.2
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.4
0.2
-0.1
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
0.5
-0.5
0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.1
-0.0
0.3
auxotrophy
YNB Glucose
0.6
0.2
0.3
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.7
0.2
0.0
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
0.3
-0.2
0.3
growth on oleic acid
YNB Glucose
0.2
0.3
0.2
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.5
0.5
0.3
0.1
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