Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_891: 9259 - K01405 PRD1 saccharolysin, at 2128133 to 2130693 9259 mRNA_892: 9260 - K11827 AP2S1 AP-2 complex subunit sigma-1, at 2131150 to 2131840 9260 mRNA_893: 9261 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 2133500 to 2134793 9261 mRNA_894: 9262 - K01694 TRP tryptophan synthase, at 2135144 to 2138242 9262 mRNA_895: 9263 - Hypothetical Protein, at 2138324 to 2139177 9263
Group Condition mRNA_891 mRNA_892 mRNA_893 mRNA_894 mRNA_895
9259
9260
9261
9262
9263
ypd buoyancy 40 hrs No Buoyancy Separation -0.4   -0.4   -1.3
auxotrophy YNB Glucose 75mM Methionine -0.0   -0.0   -0.9
ypd buoyancy 40 hrs Median Buoyancy -0.2   -0.3   -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.4   -0.2   -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2   -0.1   0.0
growth on ypd YPD 0.2   -0.3   0.0
ypd buoyancy 40 hrs High Buoyancy -0.1   -0.1   0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1   -0.1   0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.3   0.2   -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1   0.1   0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1   -0.5   1.0
auxotrophy YNB Glucose 0.3   0.2   0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2   0.2   0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.1   -0.3   0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2   -0.0   0.6
growth on ricinoleic acid YNB Glucose 0.1   0.6   -0.0
auxotrophy Dropout Complete 0.0   0.0   0.7
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1   0.6   0.1
growth on oleic acid YNB Glucose 0.3   0.2   0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2   -0.0   1.2
growth on oleic acid YNB Oleic Acid 0.1   0.5   0.9
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