Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_890: 9258 - HMMPfam-Double-stranded RNA binding motif-PF00035,HMMPfam-Ribonuclease-III-like-PF14622,ProSiteProfiles-Double stranded RNA-binding domain (dsRBD) profile.-PS50137,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Double-stranded RNA binding motif-SM00358,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF54768,SUPERFAMILY--SSF69065, at 2126820 to 2127805 9258 mRNA_891: 9259 - K01405 PRD1 saccharolysin, at 2128133 to 2130693 9259 mRNA_892: 9260 - K11827 AP2S1 AP-2 complex subunit sigma-1, at 2131150 to 2131840 9260 mRNA_893: 9261 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 2133500 to 2134793 9261 mRNA_894: 9262 - K01694 TRP tryptophan synthase, at 2135144 to 2138242 9262
Group Condition mRNA_890 mRNA_891 mRNA_892 mRNA_893 mRNA_894
9258
9259
9260
9261
9262
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.4   -0.4  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 0.1   -0.5  
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2   -0.3  
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1   -0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 0.1   -0.1  
growth on ypd YPD -0.2 0.2   -0.3  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 0.2   -0.0  
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.2   -0.1  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.2   -0.0  
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.1   -0.3  
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.0   -0.0  
auxotrophy Dropout Complete 0.3 0.0   0.0  
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 0.2   0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 0.1   0.6  
auxotrophy YNB Glucose 75mM Arginine 0.5 0.1   0.1  
facs on lipid accumulation Sorted Low BODIPY Gate 0.6 0.4   -0.2  
auxotrophy YNB Glucose 0.3 0.3   0.2  
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.3   0.2  
growth on ricinoleic acid YNB Glucose 0.1 0.1   0.6  
growth on oleic acid YNB Glucose 0.3 0.3   0.2  
growth on oleic acid YNB Oleic Acid 0.3 0.1   0.5  
remove
mRNA_890
plot		 remove
mRNA_891
plot		 remove
mRNA_892		 remove
mRNA_893
plot		 remove
mRNA_894
plot