Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_889: 9257 - HMMPfam-Ribonuclease III domain-PF00636,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF69065, at 2126028 to 2126699 9257 mRNA_890: 9258 - HMMPfam-Double-stranded RNA binding motif-PF00035,HMMPfam-Ribonuclease-III-like-PF14622,ProSiteProfiles-Double stranded RNA-binding domain (dsRBD) profile.-PS50137,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Double-stranded RNA binding motif-SM00358,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF54768,SUPERFAMILY--SSF69065, at 2126820 to 2127805 9258 mRNA_891: 9259 - K01405 PRD1 saccharolysin, at 2128133 to 2130693 9259 mRNA_892: 9260 - K11827 AP2S1 AP-2 complex subunit sigma-1, at 2131150 to 2131840 9260 mRNA_893: 9261 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 2133500 to 2134793 9261
Group Condition mRNA_889 mRNA_890 mRNA_891 mRNA_892 mRNA_893
9257
9258
9259
9260
9261
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -0.9 -0.4   -0.4
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.4 -0.1   -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 -0.2   -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.0 -0.2   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7 -0.4 0.1   -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 -0.4 0.1   -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.3 0.1   -0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 0.6 0.4   -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 -0.4 0.2   -0.0
growth on ricinoleic acid YNB Glucose -0.6 0.1 0.1   0.6
growth on ypd YPD 0.6 -0.2 0.2   -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.0 0.2   0.2
auxotrophy YNB Glucose 75mM Methionine 0.2 0.2 -0.0   -0.0
auxotrophy Dropout Complete 0.1 0.3 0.0   0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.0 0.1   0.6
auxotrophy YNB Glucose 75mM Arginine -0.2 0.5 0.1   0.1
growth on oleic acid YNB Oleic Acid -0.3 0.3 0.1   0.5
auxotrophy YNB Glucose 0.0 0.3 0.3   0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.3 0.3   0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.1 -0.3 0.2   -0.0
growth on oleic acid YNB Glucose 0.3 0.3 0.3   0.2
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