Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_887: 9255 - K04409 PAK1 p21-activated kinase 1, at 2120466 to 2123959 9255 mRNA_888: 9256 - KOG1773 Stress responsive protein, at 2124160 to 2125041 9256 mRNA_889: 9257 - HMMPfam-Ribonuclease III domain-PF00636,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF69065, at 2126028 to 2126699 9257 mRNA_890: 9258 - HMMPfam-Double-stranded RNA binding motif-PF00035,HMMPfam-Ribonuclease-III-like-PF14622,ProSiteProfiles-Double stranded RNA-binding domain (dsRBD) profile.-PS50137,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Double-stranded RNA binding motif-SM00358,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF54768,SUPERFAMILY--SSF69065, at 2126820 to 2127805 9258 mRNA_891: 9259 - K01405 PRD1 saccharolysin, at 2128133 to 2130693 9259
Group Condition mRNA_887 mRNA_888 mRNA_889 mRNA_890 mRNA_891
9255
9256
9257
9258
9259
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.3 -0.9 -0.9 -0.4
ypd buoyancy 40 hrs High Buoyancy 0.3 -0.1 -0.2 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.6 0.5 -0.4 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.1 0.1 -0.1 -0.2
auxotrophy Dropout Complete 0.1 -0.7 0.1 0.3 0.0
growth on ricinoleic acid YNB Glucose 0.7 -0.5 -0.6 0.1 0.1
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.7 0.2 0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.5 -0.2 0.5 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.4 0.2 -0.0 0.0 -0.2
growth on ypd YPD -0.0 -0.1 0.6 -0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.3 0.1 0.3 0.1
auxotrophy YNB Glucose 0.4 -0.3 0.0 0.3 0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.6 -0.3 -0.6 0.6 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 1.2 -0.4 -0.2 0.0 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.6 -0.0 0.5 -0.4 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 -0.0 0.7 -0.4 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.1 0.0 0.3 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 1.4 -0.4 -0.2 0.0 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.0 1.1 -0.3 0.2
growth on oleic acid YNB Glucose 0.6 -0.1 0.3 0.3 0.3
growth on oleic acid YNB Oleic Acid 0.8 0.5 -0.3 0.3 0.1
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