Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_886: 9254 - KOG2504 Monocarboxylate transporter, at 2117590 to 2119437 9254 mRNA_887: 9255 - K04409 PAK1 p21-activated kinase 1, at 2120466 to 2123959 9255 mRNA_888: 9256 - KOG1773 Stress responsive protein, at 2124160 to 2125041 9256 mRNA_889: 9257 - HMMPfam-Ribonuclease III domain-PF00636,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF69065, at 2126028 to 2126699 9257 mRNA_890: 9258 - HMMPfam-Double-stranded RNA binding motif-PF00035,HMMPfam-Ribonuclease-III-like-PF14622,ProSiteProfiles-Double stranded RNA-binding domain (dsRBD) profile.-PS50137,ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SMART-Double-stranded RNA binding motif-SM00358,SMART-Ribonuclease III family-SM00535,SUPERFAMILY--SSF54768,SUPERFAMILY--SSF69065, at 2126820 to 2127805 9258
Group Condition mRNA_886 mRNA_887 mRNA_888 mRNA_889 mRNA_890
9254
9255
9256
9257
9258
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3 -0.3 -0.9 -0.9
auxotrophy Dropout Complete -0.3 0.1 -0.7 0.1 0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 0.3 -0.1 -0.2 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 0.3 -0.7 0.2 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.1 -0.6 0.5 -0.4
growth on ricinoleic acid YNB Glucose 0.1 0.7 -0.5 -0.6 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.2 -0.1 0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.2 0.3 -0.5 -0.2 0.5
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.4 0.2 -0.0 0.0
auxotrophy YNB Glucose -0.0 0.4 -0.3 0.0 0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.2 -0.3 0.1 0.3
growth on ypd YPD 0.3 -0.0 -0.1 0.6 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.6 -0.0 0.5 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.5 -0.0 0.7 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 1.2 -0.4 -0.2 0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 0.6 -0.3 -0.6 0.6
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.2 0.1 0.0 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.1 0.0 1.1 -0.3
growth on oleic acid YNB Glucose -0.0 0.6 -0.1 0.3 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 1.4 -0.4 -0.2 0.0
growth on oleic acid YNB Oleic Acid -0.1 0.8 0.5 -0.3 0.3
remove
mRNA_886
plot		 remove
mRNA_887
plot		 remove
mRNA_888		 remove
mRNA_889
plot		 remove
mRNA_890
plot