Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_875: 9243 - KOG2401 Predicted MutS-related protein involved in mismatch repair, at 2086661 to 2088947 9243 mRNA_876: 9244 - K00297 metF, MTHFR methylenetetrahydrofolate reductase (NADPH), at 2089626 to 2091862 9244 mRNA_877: 9245 - K07425 CYP4A alkane 1-monooxygenase, at 2092667 to 2095053 9245 mRNA_878: 9246 - K14692 SLC30A5_7, ZNT5_7, MTP, MSC2 solute carrier family 30 (zinc transporter), member 5/7, at 2095411 to 2098626 9246 mRNA_879: 9247 - K12412 MCM1 pheromone receptor transcription factor, at 2099747 to 2101589 9247
Group Condition mRNA_875 mRNA_876 mRNA_877 mRNA_878 mRNA_879
9243
9244
9245
9246
9247
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -4.0 0.2 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -3.7 0.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -3.6 0.5 0.1 0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -3.4 0.3 0.2 -0.0
growth on oleic acid YNB Glucose 0.3 -3.3 0.1 0.4 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -2.6 -0.0 0.1 0.2
auxotrophy YNB Glucose 75mM Arginine 0.2 -3.0 -0.1 0.2 0.0
growth on ricinoleic acid YNB Glucose 0.1 -3.0 0.1 0.2 0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 -3.7 0.2 0.4 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -2.7 0.2 0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -2.1 0.2 -0.2 0.1
growth on oleic acid YNB Oleic Acid 0.1 -2.4 0.2 0.4 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -1.8 0.1 -0.1 0.2
auxotrophy YNB Glucose -0.1 -1.8 0.0 0.3 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.8 -0.1 -0.1 0.0
growth on ypd YPD -0.4 0.0 -0.3 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.3 0.0 -0.0 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.2 -0.2 0.0 0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.5 0.2 0.2 0.3
auxotrophy Dropout Complete -0.3 0.6 -0.1 0.4 0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 1.0 0.0 0.2 -0.2
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