Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_872: 9240 - K01852 LSS, ERG7 lanosterol synthase, at 2080935 to 2083844 9240 mRNA_873: 9241 - K17497 PMM phosphomannomutase, at 2084129 to 2085860 9241 mRNA_874: 9242 - BLAST Pc13g07060 [Penicillium rubens Wisconsin 54-1255], at 2086190 to 2086635 9242 mRNA_875: 9243 - KOG2401 Predicted MutS-related protein involved in mismatch repair, at 2086661 to 2088947 9243 mRNA_876: 9244 - K00297 metF, MTHFR methylenetetrahydrofolate reductase (NADPH), at 2089626 to 2091862 9244
Group Condition mRNA_872 mRNA_873 mRNA_874 mRNA_875 mRNA_876
9240
9241
9242
9243
9244
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.6 -0.1 -4.0
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.6 -0.4 -3.6
growth on oleic acid YNB Glucose     -0.7 0.3 -3.3
facs on lipid accumulation Sorted Low BODIPY Gate     0.1 0.1 -3.7
growth on ricinoleic acid YNB Glucose     -0.4 0.1 -3.0
facs on lipid accumulation Sorted No BODIPY Gate     -0.4 -0.3 -2.6
auxotrophy YNB Glucose 75mM Arginine     -0.3 0.2 -3.0
facs on lipid accumulation Sorted High BODIPY Gate     0.6 -0.2 -3.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -1.2 0.2 -1.8
growth on ricinoleic acid YNB Methylricinoleic Acid     -0.0 0.1 -2.7
growth on oleic acid YNB Oleic Acid     -0.2 0.1 -2.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy     -0.6 0.2 -2.1
growth on ricinoleic acid YNB Ricinoleic Acid     0.7 0.5 -3.7
auxotrophy YNB Glucose     -0.2 -0.1 -1.8
ypd buoyancy 40 hrs No Buoyancy Separation     -0.1 -0.4 -0.8
growth on ypd YPD     -0.8 -0.4 0.0
ypd buoyancy 40 hrs Median Buoyancy     -0.7 -0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy     0.2 -0.1 -0.5
ypd buoyancy 40 hrs Low Buoyancy     -0.3 -0.2 0.2
auxotrophy Dropout Complete     0.0 -0.3 0.6
auxotrophy YNB Glucose 75mM Methionine     0.2 0.2 1.0
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