Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_871: 9239 - BLAST lanosterol synthase [Microbotryum lychnidis-dioicae p..., at 2080475 to 2080915 9239 mRNA_872: 9240 - K01852 LSS, ERG7 lanosterol synthase, at 2080935 to 2083844 9240 mRNA_873: 9241 - K17497 PMM phosphomannomutase, at 2084129 to 2085860 9241 mRNA_874: 9242 - BLAST Pc13g07060 [Penicillium rubens Wisconsin 54-1255], at 2086190 to 2086635 9242 mRNA_875: 9243 - KOG2401 Predicted MutS-related protein involved in mismatch repair, at 2086661 to 2088947 9243
Group Condition mRNA_871 mRNA_872 mRNA_873 mRNA_874 mRNA_875
9239
9240
9241
9242
9243
growth on ypd YPD       -0.8 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation       -1.2 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy       -0.6 -0.4
ypd buoyancy 40 hrs Median Buoyancy       -0.7 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy       -0.6 -0.1
facs on lipid accumulation Sorted No BODIPY Gate       -0.4 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation       -0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy       -0.3 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy       -0.6 0.2
growth on oleic acid YNB Glucose       -0.7 0.3
growth on ricinoleic acid YNB Glucose       -0.4 0.1
auxotrophy Dropout Complete       0.0 -0.3
auxotrophy YNB Glucose       -0.2 -0.1
growth on oleic acid YNB Oleic Acid       -0.2 0.1
auxotrophy YNB Glucose 75mM Arginine       -0.3 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid       -0.0 0.1
ypd buoyancy 40 hrs High Buoyancy       0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate       0.1 0.1
facs on lipid accumulation Sorted High BODIPY Gate       0.6 -0.2
auxotrophy YNB Glucose 75mM Methionine       0.2 0.2
growth on ricinoleic acid YNB Ricinoleic Acid       0.7 0.5
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