Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_860: 9228 - HMMPfam-PX domain-PF00787,HMMPfam-BAR domain-PF03114,ProSiteProfiles-PX domain profile.-PS50195,SMART-PhoX homologous domain, present in p47phox and p40phox.-SM00312,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF64268, at 2061433 to 2063574 9228 mRNA_861: 9229 - K03513 POLM DNA polymerase mu, at 2063792 to 2065447 9229 mRNA_862: 9230 - KOG2867 Phosphotyrosyl phosphatase activator, at 2065733 to 2067114 9230 mRNA_863: 9231 - K11254 H4 histone H4, at 2067725 to 2068182 9231 mRNA_864: 9232 - K11253 H3 histone H3, at 2068568 to 2069276 9232
Group Condition mRNA_860 mRNA_861 mRNA_862 mRNA_863 mRNA_864
9228
9229
9230
9231
9232
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 0.0 0.2 -0.9 -2.3
auxotrophy YNB Glucose 75mM Arginine -2.0 -0.3 -0.3 0.0 -0.9
growth on ricinoleic acid YNB Glucose -1.9 0.2 -0.3 -0.5 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -2.1 0.1 -0.2 -0.1 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -1.0 -0.1 0.2 0.1 -2.0
growth on ricinoleic acid YNB Methylricinoleic Acid -2.4 -0.1 -0.2 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -1.3 0.2 -0.2 0.3 -1.6
growth on ricinoleic acid YNB Ricinoleic Acid -1.8 0.2 0.1 0.1 -0.9
auxotrophy Dropout Complete -0.4 -0.3 -0.4 0.2 -1.3
auxotrophy YNB Glucose 75mM Methionine -1.5 -0.7 -0.3 0.3 0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.5 0.4 -0.8 -1.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.9 0.1 -0.3 0.1 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.9 0.4 -0.3 -0.1 -0.6
auxotrophy YNB Glucose -1.0 -0.4 -0.1 0.4 -0.1
growth on oleic acid YNB Glucose -0.7 0.2 -0.0 -0.1 -0.5
growth on ypd YPD 0.2 -0.2 -0.3 0.2 -0.7
ypd buoyancy 40 hrs High Buoyancy 0.6 -0.1 0.1 0.2 -1.0
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.1 0.0 0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 0.3 0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.3 0.2 0.4 0.2
growth on oleic acid YNB Oleic Acid -0.5 0.4 0.1 0.6 0.0
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