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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_860: 9228 - HMMPfam-PX domain-PF00787,HMMPfam-BAR domain-PF03114,ProSiteProfiles-PX domain profile.-PS50195,SMART-PhoX homologous domain, present in p47phox and p40phox.-SM00312,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF64268, at 2061433 to 2063574
9228
mRNA_861: 9229 - K03513 POLM DNA polymerase mu, at 2063792 to 2065447
9229
mRNA_862: 9230 - KOG2867 Phosphotyrosyl phosphatase activator, at 2065733 to 2067114
9230
mRNA_863: 9231 - K11254 H4 histone H4, at 2067725 to 2068182
9231
mRNA_864: 9232 - K11253 H3 histone H3, at 2068568 to 2069276
9232
Group
Condition
mRNA_860
mRNA_861
mRNA_862
mRNA_863
mRNA_864
9228
9229
9230
9231
9232
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
0.0
0.2
-0.9
-2.3
auxotrophy
YNB Glucose 75mM Arginine
-2.0
-0.3
-0.3
0.0
-0.9
growth on ricinoleic acid
YNB Glucose
-1.9
0.2
-0.3
-0.5
-0.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-2.1
0.1
-0.2
-0.1
-0.6
facs on lipid accumulation
Sorted No BODIPY Gate
-1.0
-0.1
0.2
0.1
-2.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-2.4
-0.1
-0.2
0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.3
0.2
-0.2
0.3
-1.6
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.8
0.2
0.1
0.1
-0.9
auxotrophy
Dropout Complete
-0.4
-0.3
-0.4
0.2
-1.3
auxotrophy
YNB Glucose 75mM Methionine
-1.5
-0.7
-0.3
0.3
0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
0.5
0.4
-0.8
-1.5
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.9
0.1
-0.3
0.1
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.9
0.4
-0.3
-0.1
-0.6
auxotrophy
YNB Glucose
-1.0
-0.4
-0.1
0.4
-0.1
growth on oleic acid
YNB Glucose
-0.7
0.2
-0.0
-0.1
-0.5
growth on ypd
YPD
0.2
-0.2
-0.3
0.2
-0.7
ypd buoyancy
40 hrs High Buoyancy
0.6
-0.1
0.1
0.2
-1.0
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
0.1
0.0
0.1
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.0
0.3
0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.3
0.2
0.4
0.2
growth on oleic acid
YNB Oleic Acid
-0.5
0.4
0.1
0.6
0.0
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