Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_858: 9226 - K10599 PRPF19, PRP19 pre-mRNA-processing factor 19, at 2055879 to 2057799 9226 mRNA_859: 9227 - KOG1032 Uncharacterized conserved protein, contains GRAM domain, at 2057980 to 2061220 9227 mRNA_860: 9228 - HMMPfam-PX domain-PF00787,HMMPfam-BAR domain-PF03114,ProSiteProfiles-PX domain profile.-PS50195,SMART-PhoX homologous domain, present in p47phox and p40phox.-SM00312,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF64268, at 2061433 to 2063574 9228 mRNA_861: 9229 - K03513 POLM DNA polymerase mu, at 2063792 to 2065447 9229 mRNA_862: 9230 - KOG2867 Phosphotyrosyl phosphatase activator, at 2065733 to 2067114 9230
Group Condition mRNA_858 mRNA_859 mRNA_860 mRNA_861 mRNA_862
9226
9227
9228
9229
9230
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -3.3 0.0 -2.1 0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -2.4 -0.1 -2.0 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -3.6 0.3 -0.9 0.4 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -4.0 0.2 0.3 0.1 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -2.1 0.0 -1.3 0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -1.9 0.1 -1.8 0.2 0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.1 -1.5 -0.7 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -2.2 0.3 -1.0 -0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.6 -0.1 -2.4 -0.1 -0.2
growth on oleic acid YNB Glucose -1.4 -0.2 -0.7 0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -1.5 -0.1 -0.7 0.0 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -1.2 0.3 -0.9 0.1 -0.3
growth on ricinoleic acid YNB Glucose 0.6 -0.1 -1.9 0.2 -0.3
auxotrophy YNB Glucose 0.6 -0.1 -1.0 -0.4 -0.1
auxotrophy Dropout Complete 0.9 -0.3 -0.4 -0.3 -0.4
growth on oleic acid YNB Oleic Acid 0.1 -0.3 -0.5 0.4 0.1
growth on ypd YPD 2.0 0.0 0.2 -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy 1.9 -0.1 -0.0 -0.3 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 1.4 0.0 -0.2 0.5 0.4
ypd buoyancy 40 hrs Median Buoyancy 2.1 0.1 -0.0 -0.0 0.3
ypd buoyancy 40 hrs High Buoyancy 3.1 0.2 0.6 -0.1 0.1
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