Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_852: 9220 - K01923 purC phosphoribosylaminoimidazole-succinocarboxamide synthase, at 2042732 to 2043876 9220 mRNA_853: 9221 - K13125 NOSIP nitric oxide synthase-interacting protein, at 2044185 to 2045369 9221 mRNA_854: 9222 - K01620 ltaE threonine aldolase, at 2045445 to 2046969 9222 mRNA_855: 9223 - BLAST Phosphoribosyltransferase C-terminal [Ceraceosorus bo..., at 2047256 to 2049795 9223 mRNA_856: 9224 - KOG0828 Predicted E3 ubiquitin ligase, at 2049968 to 2053108 9224
Group Condition mRNA_852 mRNA_853 mRNA_854 mRNA_855 mRNA_856
9220
9221
9222
9223
9224
growth on ricinoleic acid YNB Methylricinoleic Acid   0.0 0.0 -0.3 -1.7
auxotrophy YNB Glucose 75mM Arginine   -0.6 0.3 0.1 -1.7
facs on lipid accumulation Sorted No BODIPY Gate   -0.3 0.1 -0.2 -1.3
auxotrophy YNB Glucose   -0.3 0.2 -0.1 -1.2
ypd buoyancy 40 hrs No Buoyancy Separation   0.0 -0.6 -0.3 -0.4
ypd buoyancy 40 hrs High Buoyancy   0.0 -0.3 -0.2 -0.8
auxotrophy Dropout Complete   -0.4 0.1 -0.0 -0.8
auxotrophy YNB Glucose 75mM Methionine   -0.3 0.2 0.0 -1.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.1 -0.2 -0.1 -0.5
growth on oleic acid YNB Glucose   -0.4 0.1 -0.1 -0.5
growth on ricinoleic acid YNB Glucose   0.3 -0.2 -0.1 -0.8
ypd buoyancy 40 hrs Low Buoyancy   0.0 -0.1 -0.2 -0.5
growth on ypd YPD   0.7 0.2 -0.0 -1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.3 0.1 0.0 0.0
growth on oleic acid YNB Oleic Acid   -0.0 0.0 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   0.3 -0.3 -0.0 0.0
growth on ricinoleic acid YNB Ricinoleic Acid   0.3 0.2 -0.2 -0.4
ypd buoyancy 40 hrs Median Buoyancy   -0.1 -0.2 -0.0 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.1 -0.2 0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.2 0.2 -0.0 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.0 0.2 -0.1 0.8
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