Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_844: 9212 - KOG1111 N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase, at 2022494 to 2024852 9212 mRNA_845: 9213 - KOG3346 Phosphatidylethanolamine binding protein, at 2025421 to 2026759 9213 mRNA_846: 9214 - KOG2710 Rho GTPase-activating protein, at 2027534 to 2029466 9214 mRNA_847: 9215 - HMMPfam-Amino acid permease-PF13520, at 2029732 to 2032618 9215 mRNA_848: 9216 - K17989 SDS, SDH, CHA1 L-serine/L-threonine ammonia-lyase, at 2033096 to 2034366 9216
Group Condition mRNA_844 mRNA_845 mRNA_846 mRNA_847 mRNA_848
9212
9213
9214
9215
9216
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.2 -0.9 -0.2 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.2 -0.5 -0.4 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.0 -0.8 0.0 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.6 -0.2 0.8 -0.4 -0.3
auxotrophy Dropout Complete -0.6 0.3 -0.4 0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.3 0.1 -0.2 -0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.7 0.0 -0.7 0.3 -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.1 0.2 -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 0.0 -0.2 0.1 0.1
growth on ypd YPD -0.1 -0.2 0.4 0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 -0.5 -0.1 0.8
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.0 0.0 0.1 0.1
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.1 -0.0 0.3 -0.0
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.2 0.2 0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.2 0.0 0.2 -0.2
growth on ricinoleic acid YNB Glucose 0.1 0.1 0.0 0.1 0.1
auxotrophy YNB Glucose 0.1 0.2 -0.1 0.0 0.2
auxotrophy YNB Glucose 75mM Arginine 0.1 0.2 -0.3 0.2 0.2
growth on oleic acid YNB Glucose 0.0 -0.0 -0.0 0.1 0.7
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 0.1 0.2 0.2 0.1
growth on oleic acid YNB Oleic Acid 0.3 0.0 -0.0 -0.0 0.7
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