Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_843: 9211 - KOG2262 Sexual differentiation process protein ISP4, at 2019044 to 2022236 9211 mRNA_844: 9212 - KOG1111 N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase, at 2022494 to 2024852 9212 mRNA_845: 9213 - KOG3346 Phosphatidylethanolamine binding protein, at 2025421 to 2026759 9213 mRNA_846: 9214 - KOG2710 Rho GTPase-activating protein, at 2027534 to 2029466 9214 mRNA_847: 9215 - HMMPfam-Amino acid permease-PF13520, at 2029732 to 2032618 9215
Group Condition mRNA_843 mRNA_844 mRNA_845 mRNA_846 mRNA_847
9211
9212
9213
9214
9215
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.5 -0.2 -0.9 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.3 -0.2 -0.5 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.2 -0.1 -0.5 -0.1
auxotrophy Dropout Complete -0.1 -0.6 0.3 -0.4 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.4 0.0 -0.8 0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 0.3 -0.3 0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 0.0 -0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.6 -0.2 0.8 -0.4
growth on ypd YPD -0.1 -0.1 -0.2 0.4 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.3 -0.1 0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.0 -0.2 0.2 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.1 0.0 0.0 0.1
auxotrophy YNB Glucose 75mM Arginine 0.0 0.1 0.2 -0.3 0.2
growth on oleic acid YNB Oleic Acid 0.0 0.3 0.0 -0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.1 0.0 -0.1 -0.0 0.3
auxotrophy YNB Glucose 0.3 0.1 0.2 -0.1 0.0
growth on oleic acid YNB Glucose 0.5 0.0 -0.0 -0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.7 0.0 -0.7 0.3
growth on ricinoleic acid YNB Glucose 0.5 0.1 0.1 0.0 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.0 0.2 0.0 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.4 0.1 0.2 0.2
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