Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_822: 9190 - HMMPfam-Sec7 domain-PF01369,HMMPfam-Pleckstrin homology domain-PF15410,ProSiteProfiles-PH domain profile.-PS50003,ProSiteProfiles-SEC7 domain profile.-PS50190,SMART-Sec7 domain-SM00222,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF48425,SUPERFAMILY--SSF50729, at 1965379 to 1971450 9190 mRNA_823: 9191 - HMMPfam-Fungal domain of unknown function (DUF1712)-PF08217, at 1971584 to 1974293 9191 mRNA_824: 9192 - Hypothetical Protein, at 1974667 to 1975574 9192 mRNA_825: 9193 - HMMPfam-Modifier of rudimentary (Mod(r)) protein-PF07200,ProSiteProfiles-VPS37 C-terminal domain profile.-PS51314,SUPERFAMILY--SSF140111, at 1976044 to 1976786 9193 mRNA_826: 9194 - HMMPfam-T-complex protein 11-PF05794, at 1977026 to 1979152 9194
Group Condition mRNA_822 mRNA_823 mRNA_824 mRNA_825 mRNA_826
9190
9191
9192
9193
9194
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.1 0.1 -4.1 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.9 0.3 -0.1 -4.1 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.0 -0.6 -3.7 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.3 0.2 -4.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.0 0.4 -4.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.0 -0.9 -2.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 0.0 0.4 -3.1 0.0
auxotrophy YNB Glucose -0.2 0.3 -0.6 -2.0 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.4 -0.2 -2.7 -0.1
growth on ricinoleic acid YNB Glucose -0.5 0.0 0.6 -2.2 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.7 0.2 -2.5 -0.2
auxotrophy Dropout Complete -0.4 0.2 -0.5 -0.7 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.7 -0.1 -1.7 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.2 -0.5 -0.6 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 0.2 -0.2 -1.2 0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 -0.2 0.1 0.0
growth on oleic acid YNB Oleic Acid 0.1 -0.2 0.2 -0.3 0.2
growth on oleic acid YNB Glucose -0.3 0.0 -0.1 0.3 0.3
growth on ypd YPD -0.2 -0.4 0.7 0.0 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.0 -0.1 0.4 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 1.0 0.6 -0.8 0.0
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