Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_819: 9187 - KOG1810 Cell cycle-associated protein, at 1953151 to 1958497 9187 mRNA_820: 9188 - K20495 CYP704B1 long-chain fatty acid omega-monooxygenase, at 1958610 to 1960839 9188 mRNA_821: 9189 - K14301 NUP107, NUP84 nuclear pore complex protein Nup107, at 1961565 to 1964829 9189 mRNA_822: 9190 - HMMPfam-Sec7 domain-PF01369,HMMPfam-Pleckstrin homology domain-PF15410,ProSiteProfiles-PH domain profile.-PS50003,ProSiteProfiles-SEC7 domain profile.-PS50190,SMART-Sec7 domain-SM00222,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF48425,SUPERFAMILY--SSF50729, at 1965379 to 1971450 9190 mRNA_823: 9191 - HMMPfam-Fungal domain of unknown function (DUF1712)-PF08217, at 1971584 to 1974293 9191
Group Condition mRNA_819 mRNA_820 mRNA_821 mRNA_822 mRNA_823
9187
9188
9189
9190
9191
growth on ypd YPD 0.0 -0.4   -0.2 -0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.0   -0.7 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.1   -0.9 0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.2   -0.2 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.1   0.1 -0.2
auxotrophy Dropout Complete -0.1 0.2   -0.4 0.2
ypd buoyancy 40 hrs High Buoyancy 0.2 0.1   -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.2   0.3 0.0
growth on oleic acid YNB Glucose -0.2 0.6   -0.3 0.0
growth on ricinoleic acid YNB Glucose 0.2 0.4   -0.5 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.5   -0.0 0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.1   -0.1 0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.6   -0.2 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.2   0.1 0.4
auxotrophy YNB Glucose 75mM Methionine 0.2 0.6   -0.4 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.1   -0.1 0.7
auxotrophy YNB Glucose 75mM Arginine 0.1 0.3   -0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1   -0.1 1.0
growth on oleic acid YNB Oleic Acid -0.0 0.8   0.1 -0.2
auxotrophy YNB Glucose 0.0 0.6   -0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.4   0.1 0.7
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