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Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_797: 9165 - K02265 COX5B cytochrome c oxidase subunit 5b, at 1897731 to 1898518
9165
mRNA_798: 9166 - K15376 GPHN gephyrin, at 1898956 to 1901377
9166
mRNA_799: 9167 - K01893 NARS, asnS asparaginyl-tRNA synthetase, at 1901722 to 1903948
9167
mRNA_800: 9168 - K10418 DYNLL dynein light chain LC8-type, at 1904399 to 1905250
9168
mRNA_801: 9169 - SUPERFAMILY--SSF52047, at 1905465 to 1906798
9169
Group
Condition
mRNA_797
mRNA_798
mRNA_799
mRNA_800
mRNA_801
9165
9166
9167
9168
9169
auxotrophy
Dropout Complete
-0.7
0.1
-0.2
auxotrophy
YNB Glucose
-0.8
0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.5
0.3
-0.4
auxotrophy
YNB Glucose 75mM Arginine
-0.7
0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.6
-0.1
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
0.2
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
0.1
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
0.1
-0.5
growth on oleic acid
YNB Oleic Acid
-0.4
0.2
0.4
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.0
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.3
0.3
-0.1
growth on ypd
YPD
0.1
0.1
0.4
ypd buoyancy
40 hrs High Buoyancy
0.3
0.2
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.5
-0.3
0.4
growth on oleic acid
YNB Glucose
0.1
0.1
0.4
growth on ricinoleic acid
YNB Glucose
0.5
-0.1
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.6
-0.0
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.5
0.3
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.5
0.2
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.7
0.0
0.5
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