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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_796: 9164 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1893932 to 1897116
9164
mRNA_797: 9165 - K02265 COX5B cytochrome c oxidase subunit 5b, at 1897731 to 1898518
9165
mRNA_798: 9166 - K15376 GPHN gephyrin, at 1898956 to 1901377
9166
mRNA_799: 9167 - K01893 NARS, asnS asparaginyl-tRNA synthetase, at 1901722 to 1903948
9167
mRNA_800: 9168 - K10418 DYNLL dynein light chain LC8-type, at 1904399 to 1905250
9168
Group
Condition
mRNA_796
mRNA_797
mRNA_798
mRNA_799
mRNA_800
9164
9165
9166
9167
9168
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
-0.5
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.6
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.7
0.1
auxotrophy
YNB Glucose
0.0
-0.8
0.2
auxotrophy
Dropout Complete
0.1
-0.7
0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
-0.5
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.7
0.2
growth on oleic acid
YNB Oleic Acid
0.1
-0.4
0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
0.3
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
0.6
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.1
0.0
growth on ypd
YPD
-0.0
0.1
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.5
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
0.3
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.5
0.1
growth on ricinoleic acid
YNB Glucose
0.3
0.5
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.5
0.3
growth on oleic acid
YNB Glucose
0.5
0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.5
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.7
0.0
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