Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_793: 9161 - KOG0374 Serine/threonine specific protein phosphatase PP1, catalytic subunit, at 1885981 to 1887715 9161 mRNA_794: 9162 - K14834 NOC3 nucleolar complex protein 3, at 1887871 to 1891135 9162 mRNA_795: 9163 - KOG0137 Very-long-chain acyl-CoA dehydrogenase, at 1891240 to 1893546 9163 mRNA_796: 9164 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 1893932 to 1897116 9164 mRNA_797: 9165 - K02265 COX5B cytochrome c oxidase subunit 5b, at 1897731 to 1898518 9165
Group Condition mRNA_793 mRNA_794 mRNA_795 mRNA_796 mRNA_797
9161
9162
9163
9164
9165
facs on lipid accumulation Sorted High BODIPY Gate 0.0   -0.4 -0.4 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.3   0.2 -0.0 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2   -0.2 0.3 -0.7
auxotrophy Dropout Complete -0.2   0.0 0.1 -0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1   -0.1 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3   -0.6 -0.2 0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.3   -0.1 -0.4 0.3
auxotrophy YNB Glucose 0.1   0.2 0.0 -0.8
auxotrophy YNB Glucose 75mM Methionine 0.0   0.2 -0.2 -0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.1   -0.2 -0.5 0.6
ypd buoyancy 40 hrs Low Buoyancy -0.1   0.6 0.1 -0.6
growth on oleic acid YNB Oleic Acid 0.4   0.0 0.1 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.3   0.4 -0.2 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1   -0.3 -0.1 0.5
ypd buoyancy 40 hrs Median Buoyancy -0.1   0.4 0.0 0.1
growth on ypd YPD 0.3   0.1 -0.0 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2   -0.2 0.1 0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3   -0.1 0.1 0.5
growth on ricinoleic acid YNB Glucose 0.3   -0.2 0.3 0.5
growth on oleic acid YNB Glucose 0.4   -0.1 0.5 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.3   0.0 0.2 0.7
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