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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_770: 9138 - K10765 ALKBH1 alkylated DNA repair protein alkB homolog 1, at 1835297 to 1836834
9138
mRNA_771: 9139 - KOG0254 Predicted transporter (major facilitator superfamily), at 1837244 to 1837694
9139
mRNA_772: 9140 - Hypothetical Protein, at 1837682 to 1837975
9140
mRNA_773: 9141 - BLAST alpha,alpha-trehalase [Microbotryum lychnidis-dioicae..., at 1838436 to 1839062
9141
mRNA_774: 9142 - K17457 PPP1R12C, MBS85 protein phosphatase 1 regulatory subunit 12C, at 1840086 to 1841880
9142
Group
Condition
mRNA_770
mRNA_771
mRNA_772
mRNA_773
mRNA_774
9138
9139
9140
9141
9142
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-1.3
0.1
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
-0.4
-0.3
0.1
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.9
-0.4
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.5
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.7
-0.2
0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.3
0.3
-1.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
0.1
0.2
-1.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.6
-0.2
0.1
ypd buoyancy
40 hrs High Buoyancy
0.0
-0.1
-0.2
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-0.3
-0.2
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.2
0.1
-0.2
growth on ypd
YPD
0.2
-0.4
0.0
-0.5
growth on ricinoleic acid
YNB Glucose
0.6
-0.4
0.3
-1.0
growth on oleic acid
YNB Glucose
-0.2
0.2
0.3
-0.8
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
-0.5
0.1
0.2
growth on oleic acid
YNB Oleic Acid
-0.3
0.4
0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.3
0.3
-0.0
auxotrophy
Dropout Complete
0.2
-0.3
0.3
0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.1
0.2
0.4
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.3
0.1
0.4
auxotrophy
YNB Glucose
0.3
-0.0
0.2
0.6
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