Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_744: 9112 - KOG2533 Permease of the major facilitator superfamily, at 1777917 to 1780253 9112 mRNA_745: 9113 - K00101 E1.1.2.3, lldD L-lactate dehydrogenase (cytochrome), at 1780451 to 1782779 9113 mRNA_746: 9114 - KOG0143 Iron/ascorbate family oxidoreductases, at 1783112 to 1784758 9114 mRNA_747: 9115 - K02737 PSMB5 20S proteasome subunit beta 5, at 1784917 to 1786577 9115 mRNA_748: 9116 - Hypothetical Protein, at 1787526 to 1789386 9116
Group Condition mRNA_744 mRNA_745 mRNA_746 mRNA_747 mRNA_748
9112
9113
9114
9115
9116
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.3 -0.0   -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.1 -0.5   -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 0.2 -0.5   -0.6
ypd buoyancy 40 hrs High Buoyancy -0.6 0.3 0.2   -0.1
auxotrophy Dropout Complete -0.8 -0.2 0.2   0.6
facs on lipid accumulation Sorted No BODIPY Gate 0.4 -0.1 -0.1   -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.0 0.2   -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.1 0.2   -0.1
growth on oleic acid YNB Glucose -0.7 0.2 0.3   0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 0.1 0.0   0.6
auxotrophy YNB Glucose 75mM Arginine -0.6 0.1 0.3   0.8
growth on ypd YPD -0.3 0.2 0.6   0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.4 -0.1   0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 0.2 0.4   0.4
growth on oleic acid YNB Oleic Acid 0.0 0.0 0.3   0.4
auxotrophy YNB Glucose -0.4 0.4 0.3   0.5
growth on ricinoleic acid YNB Glucose -0.0 0.3 -0.1   0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.4 -0.3   0.8
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.3 0.4   0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.4 0.3   0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.4 0.6   0.4
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