Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_741: 9109 - K12858 DDX23, PRP28 ATP-dependent RNA helicase DDX23/PRP28, at 1771104 to 1774231 9109 mRNA_742: 9110 - HMMPfam-SPT2 chromatin protein-PF08243,SMART-SPT2 chromatin protein-SM00784, at 1774415 to 1775869 9110 mRNA_743: 9111 - K08493 VTI1 vesicle transport through interaction with t-SNAREs 1, at 1776255 to 1777416 9111 mRNA_744: 9112 - KOG2533 Permease of the major facilitator superfamily, at 1777917 to 1780253 9112 mRNA_745: 9113 - K00101 E1.1.2.3, lldD L-lactate dehydrogenase (cytochrome), at 1780451 to 1782779 9113
Group Condition mRNA_741 mRNA_742 mRNA_743 mRNA_744 mRNA_745
9109
9110
9111
9112
9113
ypd buoyancy 40 hrs No Buoyancy Separation   0.4 -2.6 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate   0.0 -1.4 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine   -0.2 -1.2 -0.2 0.1
auxotrophy Dropout Complete   -0.1 -0.2 -0.8 -0.2
auxotrophy YNB Glucose 75mM Arginine   0.0 -0.4 -0.6 0.1
auxotrophy YNB Glucose   -0.0 -0.3 -0.4 0.4
facs on lipid accumulation Sorted No BODIPY Gate   -0.2 -0.5 0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.3 -0.4 0.2 0.3
growth on oleic acid YNB Glucose   0.3 0.1 -0.7 0.2
ypd buoyancy 40 hrs High Buoyancy   0.5 -0.2 -0.6 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.2 -0.6 -0.0 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -0.1 0.3 -0.4 0.2
facs on lipid accumulation Sorted Low BODIPY Gate   -0.2 -0.2 0.3 0.2
growth on ricinoleic acid YNB Glucose   0.3 -0.4 -0.0 0.3
ypd buoyancy 40 hrs Median Buoyancy   -0.1 0.2 -0.0 0.1
ypd buoyancy 40 hrs Low Buoyancy   -0.0 0.3 -0.0 -0.0
growth on ypd YPD   0.0 0.8 -0.3 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.3 -0.1 0.3 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.3 1.5 -0.3 0.4
growth on oleic acid YNB Oleic Acid   0.2 1.2 0.0 0.0
growth on ricinoleic acid YNB Ricinoleic Acid   -0.1 1.5 -0.0 0.4
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