Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_738: 9106 - K06606 iolI 2-keto-myo-inositol isomerase, at 1757999 to 1760705 9106 mRNA_739: 9107 - K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase, at 1762506 to 1766867 9107 mRNA_740: 9108 - K13103 TFIP11 tuftelin-interacting protein 11, at 1767098 to 1770950 9108 mRNA_741: 9109 - K12858 DDX23, PRP28 ATP-dependent RNA helicase DDX23/PRP28, at 1771104 to 1774231 9109 mRNA_742: 9110 - HMMPfam-SPT2 chromatin protein-PF08243,SMART-SPT2 chromatin protein-SM00784, at 1774415 to 1775869 9110
Group Condition mRNA_738 mRNA_739 mRNA_740 mRNA_741 mRNA_742
9106
9107
9108
9109
9110
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -1.5     -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.9     -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -1.0     0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.4     -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.3     -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.0     -0.1
growth on ricinoleic acid YNB Glucose -0.3 -0.4     0.3
auxotrophy YNB Glucose 75mM Methionine 0.5 -0.6     -0.2
growth on ypd YPD 0.0 -0.4     0.0
auxotrophy Dropout Complete 0.3 -0.5     -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.1     0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.4     0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.2     -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.1     -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.0     -0.1
auxotrophy YNB Glucose 0.1 0.0     -0.0
growth on oleic acid YNB Glucose -0.1 -0.0     0.3
auxotrophy YNB Glucose 75mM Arginine 0.4 -0.2     0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.2     0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 0.1     0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.2     0.2
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