Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_736: 9104 - K00034 gdh glucose 1-dehydrogenase, at 1755244 to 1756596 9104 mRNA_737: 9105 - HMMPfam-EthD domain-PF07110,SUPERFAMILY--SSF54909,TIGRFAM-TIGR02118 conserved hypothetical protein-TIGR02118, at 1756906 to 1757418 9105 mRNA_738: 9106 - K06606 iolI 2-keto-myo-inositol isomerase, at 1757999 to 1760705 9106 mRNA_739: 9107 - K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase, at 1762506 to 1766867 9107 mRNA_740: 9108 - K13103 TFIP11 tuftelin-interacting protein 11, at 1767098 to 1770950 9108
Group Condition mRNA_736 mRNA_737 mRNA_738 mRNA_739 mRNA_740
9104
9105
9106
9107
9108
ypd buoyancy 40 hrs No Buoyancy Separation -0.2   -0.7 -1.0  
growth on ricinoleic acid YNB Ricinoleic Acid 0.5   -0.2 -1.5  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2   -0.1 -0.9  
ypd buoyancy 40 hrs Low Buoyancy -0.1   -0.3 -0.3  
facs on lipid accumulation Sorted High BODIPY Gate -0.1   -0.4 0.1  
ypd buoyancy 40 hrs Median Buoyancy -0.1   -0.3 -0.0  
facs on lipid accumulation Sorted Low BODIPY Gate 0.1   -0.1 -0.4  
growth on ricinoleic acid YNB Glucose 0.3   -0.3 -0.4  
growth on ypd YPD 0.0   0.0 -0.4  
ypd buoyancy 40 hrs High Buoyancy -0.1   -0.1 0.1  
auxotrophy Dropout Complete 0.3   0.3 -0.5  
auxotrophy YNB Glucose 75mM Methionine 0.3   0.5 -0.6  
facs on lipid accumulation Sorted No BODIPY Gate -0.1   0.2 0.1  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1   0.2 0.0  
growth on oleic acid YNB Oleic Acid 0.7   -0.1 -0.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2   0.1 0.2  
auxotrophy YNB Glucose 75mM Arginine 0.3   0.4 -0.2  
growth on oleic acid YNB Glucose 0.6   -0.1 -0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0   0.3 0.2  
auxotrophy YNB Glucose 0.4   0.1 0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3   0.0 0.2  
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