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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_735: 9103 - KOG0175 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2, at 1753965 to 1755090
9103
mRNA_736: 9104 - K00034 gdh glucose 1-dehydrogenase, at 1755244 to 1756596
9104
mRNA_737: 9105 - HMMPfam-EthD domain-PF07110,SUPERFAMILY--SSF54909,TIGRFAM-TIGR02118 conserved hypothetical protein-TIGR02118, at 1756906 to 1757418
9105
mRNA_738: 9106 - K06606 iolI 2-keto-myo-inositol isomerase, at 1757999 to 1760705
9106
mRNA_739: 9107 - K07359 CAMKK calcium/calmodulin-dependent protein kinase kinase, at 1762506 to 1766867
9107
Group
Condition
mRNA_735
mRNA_736
mRNA_737
mRNA_738
mRNA_739
9103
9104
9105
9106
9107
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
-0.2
-0.7
-1.0
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.1
-0.3
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.2
-0.1
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
-0.1
-0.4
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
0.5
-0.2
-1.5
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.1
-0.3
-0.0
growth on ricinoleic acid
YNB Glucose
0.1
0.3
-0.3
-0.4
growth on ypd
YPD
0.0
0.0
0.0
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.1
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Methionine
-0.3
0.3
0.5
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
-0.0
0.3
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
0.1
0.2
0.0
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.1
-0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-0.1
0.2
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
0.3
0.0
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.2
0.1
0.2
auxotrophy
Dropout Complete
0.2
0.3
0.3
-0.5
growth on oleic acid
YNB Oleic Acid
0.1
0.7
-0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.3
0.4
-0.2
growth on oleic acid
YNB Glucose
0.3
0.6
-0.1
-0.0
auxotrophy
YNB Glucose
0.5
0.4
0.1
0.0
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