Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_733: 9101 - K13954 yiaY alcohol dehydrogenase, at 1748767 to 1750473 9101 mRNA_734: 9102 - K08149 SLC2A12, GLUT12 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12, at 1750869 to 1753209 9102 mRNA_735: 9103 - KOG0175 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2, at 1753965 to 1755090 9103 mRNA_736: 9104 - K00034 gdh glucose 1-dehydrogenase, at 1755244 to 1756596 9104 mRNA_737: 9105 - HMMPfam-EthD domain-PF07110,SUPERFAMILY--SSF54909,TIGRFAM-TIGR02118 conserved hypothetical protein-TIGR02118, at 1756906 to 1757418 9105
Group Condition mRNA_733 mRNA_734 mRNA_735 mRNA_736 mRNA_737
9101
9102
9103
9104
9105
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 0.1 -1.0 -0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.2 -0.5 -0.0  
growth on ypd YPD -0.2 -0.3 0.0 0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.3 -0.2 0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 -0.4 0.3  
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.1 -0.3 -0.1  
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.2 -0.2 -0.1  
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.2 -0.3 0.3  
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 0.2 0.3  
auxotrophy Dropout Complete -0.2 -0.4 0.2 0.3  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.4 0.1 0.2  
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.3 -0.0 -0.1  
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.0 0.0 -0.1  
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 0.4 0.2 0.1  
growth on ricinoleic acid YNB Glucose -0.0 -0.2 0.1 0.3  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.0 -0.2 0.2  
growth on oleic acid YNB Glucose 0.0 -0.4 0.3 0.6  
auxotrophy YNB Glucose -0.1 -0.4 0.5 0.4  
ypd buoyancy 40 hrs High Buoyancy 0.1 0.4 0.2 -0.1  
growth on oleic acid YNB Oleic Acid 0.1 0.1 0.1 0.7  
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.0 0.6 0.5  
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