Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_732: 9100 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 1746932 to 1748724 9100 mRNA_733: 9101 - K13954 yiaY alcohol dehydrogenase, at 1748767 to 1750473 9101 mRNA_734: 9102 - K08149 SLC2A12, GLUT12 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12, at 1750869 to 1753209 9102 mRNA_735: 9103 - KOG0175 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2, at 1753965 to 1755090 9103 mRNA_736: 9104 - K00034 gdh glucose 1-dehydrogenase, at 1755244 to 1756596 9104
Group Condition mRNA_732 mRNA_733 mRNA_734 mRNA_735 mRNA_736
9100
9101
9102
9103
9104
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.4 0.1 -1.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.1 0.1 -0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 0.2 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.1 -0.2 -0.5 -0.0
auxotrophy Dropout Complete -0.3 -0.2 -0.4 0.2 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.1 -0.4 0.1 0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.4 0.2 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.0 -0.3 -0.2 0.1
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.0 -0.2 -0.3 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.1 -0.1 -0.4 0.3
growth on ypd YPD 0.4 -0.2 -0.3 0.0 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 0.0 0.0 -0.1
growth on ricinoleic acid YNB Glucose -0.0 -0.0 -0.2 0.1 0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.2 0.3 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 0.1 0.4 0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.2 0.0 -0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.6 0.4 0.2 0.1
auxotrophy YNB Glucose -0.0 -0.1 -0.4 0.5 0.4
growth on oleic acid YNB Glucose 0.2 0.0 -0.4 0.3 0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.1 0.0 0.6 0.5
growth on oleic acid YNB Oleic Acid 0.0 0.1 0.1 0.1 0.7
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