Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_730: 9098 - KOG0061 Transporter, ABC superfamily (Breast cancer resistance protein), at 1738976 to 1743135 9098 mRNA_731: 9099 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1743450 to 1746549 9099 mRNA_732: 9100 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 1746932 to 1748724 9100 mRNA_733: 9101 - K13954 yiaY alcohol dehydrogenase, at 1748767 to 1750473 9101 mRNA_734: 9102 - K08149 SLC2A12, GLUT12 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12, at 1750869 to 1753209 9102
Group Condition mRNA_730 mRNA_731 mRNA_732 mRNA_733 mRNA_734
9098
9099
9100
9101
9102
facs on lipid accumulation Sorted High BODIPY Gate -1.0 -0.2 -0.2 -0.1 0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -0.2 0.2 -0.2 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.0 -0.2 0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 -0.1 0.3 -0.1 -0.1
auxotrophy Dropout Complete 0.4 -0.2 -0.3 -0.2 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.2 0.3 -0.6 0.4
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.0 -0.1 -0.2 -0.4
growth on ricinoleic acid YNB Glucose -0.0 -0.2 -0.0 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.1 0.2 0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 0.1 -0.1 0.4 0.1
growth on ypd YPD -0.0 0.1 0.4 -0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 0.1 -0.2 0.1 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.0 0.2 0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.0 -0.1 0.1 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.0 -0.2 0.1 0.1
auxotrophy YNB Glucose 0.3 0.3 -0.0 -0.1 -0.4
growth on oleic acid YNB Glucose 0.2 0.2 0.2 0.0 -0.4
ypd buoyancy 40 hrs High Buoyancy 0.0 0.0 -0.3 0.1 0.4
auxotrophy YNB Glucose 75mM Methionine 0.2 0.3 0.1 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.1 0.1 0.2 0.0
growth on oleic acid YNB Oleic Acid 0.3 0.3 0.0 0.1 0.1
remove
mRNA_730
plot
remove
mRNA_731
plot
remove
mRNA_732
remove
mRNA_733
plot
remove
mRNA_734
plot