Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_730: 9098 - KOG0061 Transporter, ABC superfamily (Breast cancer resistance protein), at 1738976 to 1743135
9098
mRNA_731: 9099 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1743450 to 1746549
9099
mRNA_732: 9100 - HMMPfam-Dioxygenase-PF00775,HMMPfam-Catechol dioxygenase N terminus-PF04444,SUPERFAMILY--SSF49482, at 1746932 to 1748724
9100
mRNA_733: 9101 - K13954 yiaY alcohol dehydrogenase, at 1748767 to 1750473
9101
mRNA_734: 9102 - K08149 SLC2A12, GLUT12 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12, at 1750869 to 1753209
9102
Group
Condition
mRNA_730
mRNA_731
mRNA_732
mRNA_733
mRNA_734
9098
9099
9100
9101
9102
facs on lipid accumulation
Sorted High BODIPY Gate
-1.0
-0.2
-0.2
-0.1
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
-0.9
-0.2
0.2
-0.2
0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
0.0
-0.2
0.1
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.6
-0.1
0.3
-0.1
-0.1
auxotrophy
Dropout Complete
0.4
-0.2
-0.3
-0.2
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.2
0.3
-0.6
0.4
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.0
-0.1
-0.2
-0.4
growth on ricinoleic acid
YNB Glucose
-0.0
-0.2
-0.0
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.1
0.2
0.0
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
0.1
-0.1
0.4
0.1
growth on ypd
YPD
-0.0
0.1
0.4
-0.2
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
0.1
-0.2
0.1
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.0
0.2
0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.0
-0.1
0.1
0.0
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.0
-0.2
0.1
0.1
auxotrophy
YNB Glucose
0.3
0.3
-0.0
-0.1
-0.4
growth on oleic acid
YNB Glucose
0.2
0.2
0.2
0.0
-0.4
ypd buoyancy
40 hrs High Buoyancy
0.0
0.0
-0.3
0.1
0.4
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.3
0.1
-0.0
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.1
0.1
0.2
0.0
growth on oleic acid
YNB Oleic Acid
0.3
0.3
0.0
0.1
0.1
remove
mRNA_730
plot
remove
mRNA_731
plot
remove
mRNA_732
remove
mRNA_733
plot
remove
mRNA_734
plot