Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_727: 9095 - HMMPfam-Peroxidase, family 2-PF01328,ProSiteProfiles-Heme haloperoxidase family profile.-PS51405,SUPERFAMILY--SSF47571, at 1729810 to 1731316 9095 mRNA_728: 9096 - K18669 DYRK2_3_4 dual specificity tyrosine-phosphorylation-regulated kinase 2/3/4, at 1731599 to 1733273 9096 mRNA_729: 9097 - BLAST CMGC/DYRK/DYRK2 protein kinase [Microbotryum lychnidi..., at 1733800 to 1738518 9097 mRNA_730: 9098 - KOG0061 Transporter, ABC superfamily (Breast cancer resistance protein), at 1738976 to 1743135 9098 mRNA_731: 9099 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1743450 to 1746549 9099
Group Condition mRNA_727 mRNA_728 mRNA_729 mRNA_730 mRNA_731
9095
9096
9097
9098
9099
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.2 -0.5 -1.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.2 -0.1 -0.9 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.0 -0.6 -0.6 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.1 0.1 -0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.2 -0.1 -0.1 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.2 0.3 0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.2 -0.2 0.0 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.1 0.4 -0.6 -0.1
auxotrophy Dropout Complete -0.2 0.2 -0.1 0.4 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.0 -0.2 0.0 0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 0.1 -0.0 0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.1 0.4 -0.2 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.3 0.5 -0.1 0.1
growth on ypd YPD -0.1 0.1 0.4 -0.0 0.1
growth on ricinoleic acid YNB Glucose 0.0 0.3 0.3 -0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 -0.1 0.5 -0.0 0.1
growth on oleic acid YNB Glucose -0.3 0.3 0.2 0.2 0.2
auxotrophy YNB Glucose 75mM Methionine 0.1 0.1 -0.1 0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.1 0.6 -0.1 0.0
auxotrophy YNB Glucose 0.3 0.3 0.1 0.3 0.3
growth on oleic acid YNB Oleic Acid -0.1 0.6 0.3 0.3 0.3
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