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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_726: 9094 - HMMPfam-Ferritin-like domain-PF13668, at 1727840 to 1729202
9094
mRNA_727: 9095 - HMMPfam-Peroxidase, family 2-PF01328,ProSiteProfiles-Heme haloperoxidase family profile.-PS51405,SUPERFAMILY--SSF47571, at 1729810 to 1731316
9095
mRNA_728: 9096 - K18669 DYRK2_3_4 dual specificity tyrosine-phosphorylation-regulated kinase 2/3/4, at 1731599 to 1733273
9096
mRNA_729: 9097 - BLAST CMGC/DYRK/DYRK2 protein kinase [Microbotryum lychnidi..., at 1733800 to 1738518
9097
mRNA_730: 9098 - KOG0061 Transporter, ABC superfamily (Breast cancer resistance protein), at 1738976 to 1743135
9098
Group
Condition
mRNA_726
mRNA_727
mRNA_728
mRNA_729
mRNA_730
9094
9095
9096
9097
9098
ypd buoyancy
40 hrs No Buoyancy Separation
-1.9
-0.1
0.0
-0.6
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.7
-0.2
-0.5
-1.0
ypd buoyancy
40 hrs Median Buoyancy
-0.7
0.0
-0.2
-0.1
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
-0.0
-0.1
0.1
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
-0.2
0.2
-0.1
-0.9
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.9
-0.1
0.1
0.4
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
0.2
0.0
-0.2
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.2
0.1
0.4
-0.6
growth on ypd
YPD
-0.2
-0.1
0.1
0.4
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.4
0.1
-0.2
-0.2
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.2
-0.2
0.3
0.1
auxotrophy
Dropout Complete
0.0
-0.2
0.2
-0.1
0.4
growth on oleic acid
YNB Glucose
-0.1
-0.3
0.3
0.2
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.3
-0.0
0.1
-0.0
0.2
growth on ricinoleic acid
YNB Glucose
0.1
0.0
0.3
0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.0
-0.1
0.5
-0.0
growth on oleic acid
YNB Oleic Acid
-0.3
-0.1
0.6
0.3
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.6
0.2
-0.3
0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.6
0.1
0.1
-0.1
0.2
auxotrophy
YNB Glucose
-0.0
0.3
0.3
0.1
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
0.3
-0.1
0.6
-0.1
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