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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_723: 9091 - K07127 uraH, pucM, hiuH 5-hydroxyisourate hydrolase, at 1722992 to 1724496
9091
mRNA_724: 9092 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 1724754 to 1725732
9092
mRNA_725: 9093 - KOG2702 Predicted panthothenate kinase/uridine kinase-related protein, at 1725841 to 1726998
9093
mRNA_726: 9094 - HMMPfam-Ferritin-like domain-PF13668, at 1727840 to 1729202
9094
mRNA_727: 9095 - HMMPfam-Peroxidase, family 2-PF01328,ProSiteProfiles-Heme haloperoxidase family profile.-PS51405,SUPERFAMILY--SSF47571, at 1729810 to 1731316
9095
Group
Condition
mRNA_723
mRNA_724
mRNA_725
mRNA_726
mRNA_727
9091
9092
9093
9094
9095
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.4
-0.2
-1.9
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.0
-0.1
-0.5
-0.4
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.2
-0.5
-0.9
-0.1
growth on oleic acid
YNB Oleic Acid
-0.5
-0.3
-0.4
-0.3
-0.1
growth on oleic acid
YNB Glucose
-0.3
-0.2
-0.1
-0.1
-0.3
growth on ricinoleic acid
YNB Glucose
-0.4
-0.4
-0.3
0.1
0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.1
-0.1
-0.7
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.0
0.1
-0.4
0.3
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.4
-0.3
0.3
-0.2
auxotrophy
Dropout Complete
-0.6
0.0
0.2
0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.4
0.0
-0.1
-0.1
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
-0.0
-0.3
0.3
-0.0
growth on ypd
YPD
-0.1
0.2
-0.1
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.4
-0.1
-0.2
0.6
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.5
0.2
0.3
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.3
-0.2
0.1
0.2
auxotrophy
YNB Glucose
-0.3
0.1
0.1
-0.0
0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.0
-0.2
0.4
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.3
-0.1
0.6
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.8
0.2
-0.1
0.3
-0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
0.1
-0.2
0.5
0.3
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