Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_722: 9090 - HMMPfam-Thiopurine S-methyltransferase (TPMT)-PF05724,ProSiteProfiles-Thiopurine or thiol or thiocyanate S-methyltransferase (TPMT) family profile.-PS51585,SUPERFAMILY--SSF53335, at 1721535 to 1722519 9090 mRNA_723: 9091 - K07127 uraH, pucM, hiuH 5-hydroxyisourate hydrolase, at 1722992 to 1724496 9091 mRNA_724: 9092 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 1724754 to 1725732 9092 mRNA_725: 9093 - KOG2702 Predicted panthothenate kinase/uridine kinase-related protein, at 1725841 to 1726998 9093 mRNA_726: 9094 - HMMPfam-Ferritin-like domain-PF13668, at 1727840 to 1729202 9094
Group Condition mRNA_722 mRNA_723 mRNA_724 mRNA_725 mRNA_726
9090
9091
9092
9093
9094
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 0.2 -0.4 -0.2 -1.9
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.5 -0.2 -0.5 -0.9
facs on lipid accumulation Sorted Low BODIPY Gate 0.9 -1.0 -0.1 -0.5 -0.4
growth on oleic acid YNB Oleic Acid 0.4 -0.5 -0.3 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 0.2 -0.3 -0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -1.0 0.1 -0.4 0.3
growth on ricinoleic acid YNB Glucose 0.4 -0.4 -0.4 -0.3 0.1
growth on ypd YPD -0.4 -0.1 0.2 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.4 0.0 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy 0.5 -0.2 -0.1 -0.1 -0.7
growth on oleic acid YNB Glucose 0.4 -0.3 -0.2 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.2 -0.4 -0.3 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 0.1 -0.5 0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 0.1 0.1 -0.2 0.5
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.3 -0.0 -0.3 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.1 -0.3 -0.1 0.6
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.4 -0.1 -0.2 0.6
auxotrophy Dropout Complete 0.4 -0.6 0.0 0.2 0.0
auxotrophy YNB Glucose 0.7 -0.3 0.1 0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.8 -0.1 -0.0 -0.2 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.8 0.2 -0.1 0.3
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