Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_717: 9085 - K00058 serA, PHGDH D-3-phosphoglycerate dehydrogenase, at 1712409 to 1714095 9085 mRNA_718: 9086 - KOG2776 Metallopeptidase, at 1714383 to 1716364 9086 mRNA_719: 9087 - HMMPfam-Protein of unknown function (DUF3074)-PF11274, at 1716793 to 1718081 9087 mRNA_720: 9088 - K00993 EPT1 ethanolaminephosphotransferase, at 1718861 to 1720406 9088 mRNA_721: 9089 - Hypothetical Protein, at 1720522 to 1720982 9089
Group Condition mRNA_717 mRNA_718 mRNA_719 mRNA_720 mRNA_721
9085
9086
9087
9088
9089
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.5 -0.8 -0.3  
growth on ricinoleic acid YNB Glucose   -0.5 -0.5 -0.5  
facs on lipid accumulation Sorted High BODIPY Gate   -1.0 -0.1 -0.3  
growth on ricinoleic acid YNB Ricinoleic Acid   -0.7 -0.4 0.3  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.3 -0.4 -0.6  
auxotrophy YNB Glucose 75mM Arginine   -0.5 -0.1 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.2 -0.3 -0.5  
auxotrophy Dropout Complete   -0.2 -0.2 -0.2  
auxotrophy YNB Glucose 75mM Methionine   -0.2 -0.2 -0.0  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.4 -0.2 -0.6  
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.8 -0.4 -0.9  
auxotrophy YNB Glucose   -0.3 0.0 -0.1  
facs on lipid accumulation Sorted No BODIPY Gate   -0.2 0.0 -0.1  
facs on lipid accumulation Sorted Low BODIPY Gate   0.2 -0.1 -0.3  
ypd buoyancy 40 hrs Median Buoyancy   -0.3 0.1 0.2  
growth on oleic acid YNB Oleic Acid   -0.4 0.2 0.4  
ypd buoyancy 40 hrs High Buoyancy   -0.1 0.1 0.2  
ypd buoyancy 40 hrs Low Buoyancy   -0.1 0.2 0.2  
growth on oleic acid YNB Glucose   0.0 0.3 0.0  
ypd buoyancy 40 hrs No Buoyancy Separation   -0.6 0.7 0.3  
growth on ypd YPD   0.5 -0.0 0.5  
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