Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_706: 9074 - BLAST Myelin gene regulatory factor [Chaetura pelagica], at 1688032 to 1688891 9074 mRNA_707: 9075 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1689670 to 1691771 9075 mRNA_708: 9076 - HMMPfam-Ferritin-like domain-PF13668, at 1692060 to 1693397 9076 mRNA_709: 9077 - K08775 BRCA2, FANCD1 breast cancer 2 susceptibility protein, at 1694399 to 1698266 9077 mRNA_710: 9078 - Hypothetical Protein, at 1698369 to 1699949 9078
Group Condition mRNA_706 mRNA_707 mRNA_708 mRNA_709 mRNA_710
9074
9075
9076
9077
9078
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -2.6 -0.2 -0.2 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 -0.7 -0.7 -1.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -1.6 -0.1 -1.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.0 -0.0 -1.7 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.7 -0.1 -0.5 -0.0
auxotrophy Dropout Complete 0.2 -0.4 -0.0 -1.0 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 -0.4 -0.5 0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.2 0.0 -0.8 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.1 0.1 -1.1 -0.1
auxotrophy YNB Glucose 0.1 -0.1 0.1 -0.7 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.0 0.0 -0.4 -0.1
growth on oleic acid YNB Oleic Acid 0.3 -0.7 0.1 0.2 -0.2
growth on ricinoleic acid YNB Glucose 0.0 0.1 0.0 -0.4 -0.0
growth on ypd YPD -0.6 0.4 -0.2 -0.1 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.2 -0.2 -0.4 0.3
growth on oleic acid YNB Glucose 0.3 -0.1 -0.0 -0.1 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.4 -0.5 0.4 0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 0.1 -0.2 0.6 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.1 0.5 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.0 -0.5 0.6 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.0 0.0 0.9 -0.0
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