Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_704: 9072 - Hypothetical Protein, at 1685751 to 1686578 9072 mRNA_705: 9073 - Hypothetical Protein, at 1686882 to 1687681 9073 mRNA_706: 9074 - BLAST Myelin gene regulatory factor [Chaetura pelagica], at 1688032 to 1688891 9074 mRNA_707: 9075 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 1689670 to 1691771 9075 mRNA_708: 9076 - HMMPfam-Ferritin-like domain-PF13668, at 1692060 to 1693397 9076
Group Condition mRNA_704 mRNA_705 mRNA_706 mRNA_707 mRNA_708
9072
9073
9074
9075
9076
growth on ricinoleic acid YNB Ricinoleic Acid 0.4 -0.1 -0.4 -2.6 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.2 -0.2 -1.6 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 -1.0 -0.2 0.4 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.0 -0.5 -0.7 -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.2 -0.3 -0.7 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.3 -0.3 -0.1 -0.4
growth on ricinoleic acid YNB Glucose -0.4 -0.3 0.0 0.1 0.0
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.3 -0.0 -0.2 0.0
auxotrophy YNB Glucose -0.2 -0.3 0.1 -0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.2 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 0.1 -0.4 0.1 -0.2
auxotrophy Dropout Complete 0.2 -0.1 0.2 -0.4 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.0 0.1 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.3 0.4 -0.0 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 -0.1 0.2 0.2 -0.2
growth on oleic acid YNB Oleic Acid 0.4 -0.2 0.3 -0.7 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.0 0.0 -0.0 0.0
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.3 0.2 -0.1 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 -0.2 0.0 0.0
growth on ypd YPD -0.1 0.6 -0.6 0.4 -0.2
growth on oleic acid YNB Glucose 0.4 0.0 0.3 -0.1 -0.0
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